BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB016D06LP1|AL427002
(1032 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1667 1952 0.0
>3x_Contig1667
Length = 12071
Score = 1952 bits (982), Expect = 0.0
Identities = 1023/1034 (98%), Gaps = 4/1034 (0%)
Strand = Plus / Minus
Query: 1 gatctacaatgttttgaagagggattttgatagtcatagtgttggtatcagagtgctgag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5078 gatctacaatgttttgaagagggattttgatagtcatagtgttggtatcagagtgctgag 5019
Query: 61 aagcaaacatctgttttttgatgctactcacccagtgtcttgcagaatggaaagagtcag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5018 aagcaaacatctgttttttgatgctactcacccagtgtcttgcagaatggaaagagtcag 4959
Query: 121 ctttcaataccagcgactgatctttaatactcaattcaaactttgttgggttgttctcac 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4958 ctttcaataccagcgactgatctttaatactcaattcaaactttgttgggttgttctcac 4899
Query: 181 ttgaagtcatttgcacgctgctaatatctctcaaatcaatagtcaaaagggggaaatata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4898 ttgaagtcatttgcacgctgctaatatctctcaaatcaatagtcaaaagggggaaatata 4839
Query: 241 gatctgtcgaagagttatgaaagcttaatgtatgacccttcaaaaccacccaataacgat 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4838 gatctgtcgaagagttatgaaagcttaatgtatgacccttcaaaaccacccaataacgat 4779
Query: 301 gagatttgctcaaaacgtgaccgctgatgagacgcaacgacccagtgacattgaaatccg 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4778 gagatttgctcaaaacgtgaccgctgatgagacgcaacgacccagtgacattgaaatccg 4719
Query: 361 actcaaagttcggtatgaacgcgaagaaaaaaaggtgtttgttagtcaagtatgcatgtc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4718 actcaaagttcggtatgaacgcgaagaaaaaaaggtgtttgttagtcaagtatgcatgtc 4659
Query: 421 cttgtatcataatatctcgtagcagccagcatgggtattcttcaatgtatttctcatcat 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4658 cttgtatcataatatctcgtagcagccagcatgggtattcttcaatgtatttctcatcat 4599
Query: 481 cgttaggaagaaatttctttatcaaccgttccctgattaattcctttctcgatttagaat 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4598 cgttaggaagaaatttctttatcaaccgttccctgattaattcctttctcgatttagaat 4539
Query: 541 ctgtactgatctgcgaaattgcatcagcgttcatttcaatagamacttcaaacaaagtct 600
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4538 ctgtactgatctgcgaaattgcatcagcgttcatttcaatagaaacttcaaacaaagtct 4479
Query: 601 ggttagcctgtgaactagtatcaagaacagacgctgcatcgttcatcagctctaattcat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4478 ggttagcctgtgaactagtatcaagaacagacgctgcatcgttcatcagctctaattcat 4419
Query: 661 cctcgtcattctcttctttatctcctaattcatttattccaacgtacatgcttgctgtag 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4418 cctcgtcattctcttctttatctcctaattcatttattccaacgtacatgcttgctgtag 4359
Query: 721 ctataagcccagcaaagctctttgccatatattgtgtcttagcaacgtcttccaccgtat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4358 ctataagcccagcaaagctctttgccatatattgtgtcttagcaacgtcttccaccgtat 4299
Query: 781 ctgtgtcctgaccgtggttttctgacccattatcaaacttctttgataaggcttgaagtc 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4298 ctgtgtcctgaccgtggttttctgacccattatcaaacttctttgataaggcttgaagtc 4239
Query: 841 gagattccagggtctcggtgttggaggaaacaaatcgcaagtctgccaacagaatggcat 900
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 4238 gagattccagggtctcggtgttggaggaaacaaatcgcaagtctg-caacagaatggcat 4180
Query: 901 aattgatctacaggagatacacttctccttacaaatgccctcggatctacmaacatagat 960
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 4179 aattgatctacaggagatacacttctccttacaaatgccctcggatctacaaacatagat 4120
Query: 961 cttgtaaa-cytgacggactcttttgatgttccgatgactccctcsggattattgggtag 1019
|||||||| | ||||||||||||||||||||||||||| ||| || | |||||| |||||
Sbjct: 4119 cttgtaaaccttgacggactcttttgatgttccgatgaatccttcggcattatt-ggtag 4061
Query: 1020 ggg-tgttgcgttc 1032
||| ||||||||||
Sbjct: 4060 gggatgttgcgttc 4047
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7096
Number of Sequences: 1807
Number of extensions: 7096
Number of successful extensions: 51
Number of sequences better than 1.0e-20: 1
length of query: 1032
length of database: 10,358,551
effective HSP length: 16
effective length of query: 1016
effective length of database: 10,329,639
effective search space: 10494913224
effective search space used: 10494913224
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.9 bits)